Alignment to Anterior/Posterior Commissures (AC/PC)ΒΆ

sbl.sabre.workflows.ACPCAlignmentWorkflow(name='AlignToACPC', *args, **kwargs)ΒΆ

Create a workflow incorporating sbl.sabre.interfaces.AlignToACPC to align a T1 image to the plane defined by the anterior and posterior commissures (AC/PC).

Parameters:name – Name of workflow

Inputs:

Parameters:
  • inputnode.T1_image – Input T1 image
  • inputnode.ACPC_template – AC/PC template
  • inputnode.BET_threshold

Outputs:

Parameters:
  • outputnode.T1_image_toACPC – Transformation from T1 to AC/PC space
  • outputnode.T1_image_inACPC – T1 image in AC/PC space

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